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Analytical validation of a proliferation-based molecular signature used as a prognostic marker in early stage lung adenocarcinoma

    M Bryan Warf

    *Author for correspondence:

    E-mail Address: bwarf@myriad.com

    Myriad Genetic Laboratories Inc., 320 Wakara Way, Salt Lake City, UT 84108, USA

    ,
    Placede G Fosso

    Myriad Genetic Laboratories Inc., 320 Wakara Way, Salt Lake City, UT 84108, USA

    ,
    Elisha Hughes

    Myriad Genetic Laboratories Inc., 320 Wakara Way, Salt Lake City, UT 84108, USA

    ,
    Michael Perry

    Myriad Genetic Laboratories Inc., 320 Wakara Way, Salt Lake City, UT 84108, USA

    ,
    Krystal L Brown

    Myriad Genetic Laboratories Inc., 320 Wakara Way, Salt Lake City, UT 84108, USA

    ,
    Julia E Reid

    Myriad Genetic Laboratories Inc., 320 Wakara Way, Salt Lake City, UT 84108, USA

    ,
    Kathryn A Kolquist

    Myriad Genetic Laboratories Inc., 320 Wakara Way, Salt Lake City, UT 84108, USA

    ,
    Susanne Wagner

    Myriad Genetic Laboratories Inc., 320 Wakara Way, Salt Lake City, UT 84108, USA

    ,
    Alexander Gutin

    Myriad Genetic Laboratories Inc., 320 Wakara Way, Salt Lake City, UT 84108, USA

    &
    Benjamin Roa

    Myriad Genetic Laboratories Inc., 320 Wakara Way, Salt Lake City, UT 84108, USA

    Published Online:https://doi.org/10.2217/bmm.15.46

    Aims: The aim of these studies was to validate the analytical performance of a cell cycle progression (CCP) gene signature that provides prognostic information for early stage lung adenocarcinomas. Materials & methods: Formalin-fixed paraffin-embedded (FFPE) lung resections were evaluated by quantitative RT-PCR for the expression of 31 target and 15 housekeeper genes comprising the CCP score. Results: The signature had a standard deviation (SD) of 0.06 score units and a dynamic range spanning CCP scores between -13 and 14. The average amplicon efficiencies for target and housekeeper genes were 107% and 105%, respectively. All but one amplicon had a SD <0.5 CT. Conclusion: These studies demonstrate that the gene signature is robust and reproducible, making it suitable for use in a clinical setting.

    Papers of special note have been highlighted as: • of interest; •• of considerable interest.

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