Quantification of mycobacterial proteins in extrapulmonary tuberculosis cases by nano-based real-time immuno-PCR
Abstract
Aim: Diagnosis of extrapulmonary tuberculosis (EPTB) is difficult, and a rapid and dependable diagnostic test is urgently needed. Methods: A nano-based assay, SYBR Green magnetic bead-coupled gold nanoparticle-based real-time immuno-polymerase chain reaction (MB-AuNP-RT-I-PCR) was studied for the quantitative detection of Mycobacterium tuberculosis MPT-64+CFP-10 proteins in clinically suspected EPTB patients. Results: A wide range (270 fg/ml–9.9 ng/ml) of MPT-64+CFP-10 was quantified by MB-AuNP-RT-I-PCR in EPTB cases, whereas magneto-ELISA demonstrated a narrow range (1.8–10 ng/ml). Furthermore, high sensitivity (88.2%) and specificity (100%) were attained by MB-AuNP-RT-I-PCR in EPTB (n = 51) and non-TB control (n = 49) subjects, respectively. Both MB-AuNP-I-PCR/magneto-ELISA exhibited significantly lower (p < 0.05–0.01) sensitivities than MB-AuNP-RT-I-PCR. Conclusion: The MB-AuNP-RT-I-PCR described herein shows good diagnostic accuracy, which may translate into a credible diagnostic kit.
Plain language summary
Extrapulmonary tuberculosis (EPTB) is a type of tuberculosis disease caused by the bacteria Mycobacterium tuberculosis (Mtb) that affect other regions of the body, rather than the lungs. Detecting EPTB is difficult, and a fast and reliable test is needed. This study developed a test based on a small particle, known as a nanoparticle, to identify Mtb in people with EPTB. The test shows good accuracy and could be used for routine testing.
Graphical abstract
Papers of special note have been highlighted as: • of interest; •• of considerable interest
References
- 1. World Health Organization. Global tuberculosis report (2022). www.who.int/teams/global-tuberculosis-programme/tb-reports/global-tuberculosis-report-2022
- 2. The intersecting pandemics of tuberculosis and COVID-19: population-level and patient-level impact, clinical presentation, and corrective interventions. Lancet Respir. Med. 10(6), 603–622 (2022).
- 3. Diagnosis of extrapulmonary tuberculosis by PCR. FEMS Immunol. Med. Microbiol. 66, 20–36 (2012).
- 4. Diagnosis of peritoneal tuberculosis by real-time immuno-PCR assay based on detection of a cocktail of Mycobacterium tuberculosis CFP-10 and HspX proteins. Expert. Rev. Gastroenterol. Hepatol. 16(6), 577–586 (2022).
- 5. . Diagnosis and treatment of extrapulmonary tuberculosis. Tuberc. Respir. Dis. 78(2), 47–55 (2015).
- 6. Diagnosis of urogenital tuberculosis by multiplex-nested PCR targeting mpt64 (Rv1980c) and IS6110: comparison with multiplex PCR and GeneXpert® MTB/RIF. Lett. Appl. Microbiol. 75(4), 857–858 (2022).
- 7. . Evaluation of the Cepheid Xpert MTB/RIF assay. Expert. Rev. Mol. Diagn. 15(1), 9–22 (2015).
- 8. Identification of mycobacterial MPT-64 and ESAT-6 proteins in urogenital tuberculosis patients by real-time immuno-PCR. Future. Microbiol. 17(11), 829–842 (2022).
- 9. World Health Organization. WHO meeting report of a technical expert-consultation: non-inferiority analysis of Xpert MTB/RIF Ultra compared to Xpert MTB/RIF (2017). www.who.int/publications/i/item/WHO-HTM-TB-2017.04
- 10. Xpert MTB/RIF Ultra and Xpert MTB/RIF assays for extrapulmonary tuberculosis and rifampicin resistance in adults. Cochrane Database Syst. Rev. 1(1), CD012768 (2021).
- 11. Xpert MTB/RIF Ultra outperformed the Xpert assay in tuberculosis lymphadenitis diagnosis: a prospective head-to-head cohort study. Int. J. Infect. Dis. 122, 741–746 (2022).
- 12. World Health Organization. Molecular assays intended as initial tests for the diagnosis of pulmonary and extrapulmonary TB and rifampicin resistance in adults and children: rapid communication. Policy update (2020). https://apps.who.int/iris/bitstream/handle/10665/330395/9789240000339-eng.pdf
- 13. Advances in molecular diagnosis of tuberculosis. J. Clin. Microbiol. 58(10), e01582–19 (2020).
- 14. Expedited diagnosis of pediatric tuberculosis using Truenat MTB-Rif Dx and GeneXpert MTB/RIF. Sci. Rep. 13 (1), 6976 (2023).
- 15. . Rapid molecular assays for the diagnosis of drug-resistant tuberculosis. Infect. Drug. Resist. 15, 4971–4984 (2022).
- 16. World Health Organization. Rapid communication: TB antigen-based skin tests for the diagnosis of TB infection (2022). www.who.int/publications/i/item/WHO-UCN-TB-2022.1
- 17. Immuno-PCR, a new technique for the serodiagnosis of tuberculosis. J. Microbiol. Methods. 139, 218–219 (2017).
- 18. Quantitative detection of a cocktail of mycobacterial MPT64 and PstS1 in tuberculosis patients by real-time immuno-PCR. Future Microbiol. 14(3), 223–233 (2019).
- 19. Detection of mycobacterial CFP-10 (Rv3874) protein in tuberculosis patients by gold nanoparticle-based real-time immuno-PCR. Future Microbiol. 15(8), 601–612 (2020). •• Describes the detection of mycobacterial CFP-10 by gold nanoparticle-based real-time immuno-polymerase chain reaction (AuNP-RT-I-PCR) in bodily fluids of tuberculosis (TB) patients.
- 20. Diagnosis of tuberculosis by nanoparticle-based immuno-PCR assay based on mycobacterial MPT64 and CFP-10 detection. Nanomedicine (Lond.). 15, 2609–2604 (2020). •• Development of magnetic bead-coupled gold nanoparticle immuno-polymerase chain reaction (MB-AuNP-I-PCR) assay for detecting a cocktail of Mtb MPT-64 and CFP-10 proteins in TB patients.
- 21. . Immuno-PCR: a promising ultra-sensitive diagnostic method to detect antigens and antibodies. Trends. Microbiol. 19, 295–302 (2011).
- 22. Schiff-base silver nanocomplexes formation on natural biopolymer coated mesoporous silica contributed to the improved curative effect on infectious microbes. Nano. Res. 14(8), 2735–2748 (2021).
- 23. Detection of Mycobacterium tuberculosis purified ESAT-6 (Rv3875) by magnetic bead-coupled gold nanoparticle-based immuno-PCR assay. Int. J. Nanomed. 13, 8523–8535 (2018). •• Detailed the detection of recombinant Mtb ESAT-6 protein by MB-AuNP-I-PCR assay.
- 24. One-pot synthesis of α-Linolenic acid nanoemulsion-templated drug-loaded silica mesocomposites as efficient bactericide against drug-resistant Mycobacterium tuberculosis. Eur. J. Pharm. Sci. 176, 106261 (2022).
- 25. Detecting respiratory syncytial virus using nanoparticle-amplified immuno-PCR. Methods. Mol. Biol. 1026, 93–110 (2013). • Describes the detection of respiratory syncytial virus in human epithelial type-2 cells by MB-AuNP-RT-I-PCR assay.
- 26. World Health Organization. Index-TB guidelines: guidelines on extra-pulmonary tuberculosis in India (2016). https://tbcindia.gov.in/WriteReadData/l892s/5585665076Index-TB%20Guidelines.pdf
- 27. Gold nanoparticle enhanced immuno-PCR for ultrasensitive detection of Hantaan virus nucleocapsid protein. J. Immunol. Methods. 346(1–2), 64–70 (2009).
- 28. Non-toxic L-phenylalanine doped carbon dots: high performance photoluminescent agent for bioimaging. ECS. Trans. 107(1), 8329–8338 (2022).
- 29. Diagnosis of abdominal tuberculosis by multi-targeted (mpt64 and IS6110) loop-mediated isothermal amplification assay. J. Gastroenterol. Hepatol. 37(12), 2264–2271 (2022).
- 30. A fluorescence-based method for determining the surface coverage and hybridization efficiency of thiol capped oligonucleotides bound to gold thin films and nanoparticles. Anal. Chem. 72, 5535 (2000).
- 31. . A gold nanoparticle-based immunochromatographic assay: the influence of nanoparticulate size. Analyst. 137(5), 1174–1181 (2012).
- 32. . Synthesis and characterization of gold nanoparticles as a sensing tool for the lateral flow immunoassay development. Sensors. Int. 1, 100051 (2020).
- 33. . Study of the stability of functionalized gold nanoparticles for the colorimetric detection of dipeptidyl peptidase IV. Appl. Sci. 8(12), 2589 (2018).
- 34. Preparation of gold nanoparticles by microwave heating and application of spectroscopy to study conjugate of gold nanoparticles with antibody E. coli O157: H7. Adv. Nat. Sci. Nanosci. Nanotechnol. 6(3), 035015 (2015).
- 35. Fast and sensitive immuno-PCR assisted by plasmonic magnetic nanoparticles. Appl. Mater. Today 23, 101054 (2021).
- 36. . Development of an immunomagnetic separation-ELISA for the detection of Burkholderiapseudomallei in blood samples. Asian Pac. J. Allergy Immunol. 39(1), 35–43 (2021).
- 37. Magneto immuno-PCR: a novel immunoassay based on biogenic magnetosome nanoparticles. Biochem. Biophys. Res. Commun. 357(2), 391–396 (2007).
- 38. Magnetic nanozyme-linked immunosorbent assay for ultrasensitive influenza A virus detection. ACS. Appl. Mater. Interfaces. 10(15), 12534–12543 (2018).
- 39. . Detection of potential biomarkers associated with outrageous diseases and environmental pollutants by nanoparticle-based immuno-PCR assays. Anal. Biochem. 113444, 1–13 (2019). • Meticulously details the use of nanoparticle-based immuno-polymerase chain reaction assays to detect potential biomarkers associated with several diseases and environmental pollutants.
- 40. . Detection of potential microbial antigens by immuno-PCR (PCR-amplified immunoassay). J. Med. Microbiol. 63(5), 627–641 (2014).
- 41. Detection of HIV-1 p24 Gag in plasma by a nanoparticle-based bio-barcode-amplification method. Nanomedicine (Lond.). 3(3), 293–303 (2008). • Demonstrates the utility of MB-AuNP-RT-I-PCR assay for the detection of HIV-1 p24 Gag protein in plasma samples of HIV-positive patients.
- 42. Magnetofluidic immuno-PCR for point-of-care COVID-19 serological testing. Biosens. Bioelectron. 195, 113656 (2022).
- 43. World Health Organization. High-priority target product profiles for new tuberculosis diagnostics: report of a consensus meeting (28–29 April 2014). www.who.int/tb/publications/tpp report/en/